U.S. Department of Health and Human Services — National Institutes of Health

Structure of sybody MR17 in complex with the SARS-CoV-2 S receptor-binding domain (RBD)

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Created on Fri, 2020-11-13 09:13, last updated on Fri, 2020-11-13 09:20

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General Information

This Model was autogenerated from the "Quick Submit" tool.

Model ID

3DPX-015105

Category

Proteins, Macromolecules and Viruses

Keyword(s)

Coronavirus, SARS-CoV-2, COVID-19, nanobody, neutralizing antibody, receptor binding protein, S Protein, synthetic antibody, VHH., PROTEIN BINDING

Protein Data Bank ID

SARS-CoV-2, COVID-19

Experimental Method

X-RAY DIFFRACTION

Resolution

2.77

Model Details

Associated Species

Escherichia coli BL21(DE3)

Oligomeric Details

dimeric

R-Factor

0.2110

Scattering Type

x-ray

Attribution

Citation Title

Rapid selection of synthetic nanobodies against the receptor binding domain of SARS-CoV-2 S protein

STL/VRML Files

PDB-7C8W-ribbon-secondary.wrl

PDB-7C8W-ribbon-rainbow.wrl

PDB-7C8W-ribbon-bychain.wrl

PDB-7C8W-ribbon.stl

PDB-7C8W-surf-bychain.wrl

PDB-7C8W-surf-hydropathy.wrl

PDB-7C8W-surf-coulombic.wrl

PDB-7C8W-surf.stl

X3D Files

PDB-7C8W-ribbon-secondary.x3d

PDB-7C8W-ribbon-rainbow.x3d

PDB-7C8W-ribbon-bychain.x3d

PDB-7C8W-ribbon.x3d

PDB-7C8W-surf-bychain.x3d

PDB-7C8W-surf-hydropathy.x3d

PDB-7C8W-surf-coulombic.x3d

PDB-7C8W-surf.x3d

PDB-7C8W-ribbon-secondary.x3d

PDB-7C8W-ribbon-rainbow.x3d

PDB-7C8W-ribbon-bychain.x3d

PDB-7C8W-ribbon.x3d

PDB-7C8W-surf-bychain.x3d

PDB-7C8W-surf-hydropathy.x3d

PDB-7C8W-surf-coulombic.x3d

PDB-7C8W-surf.x3d

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