A beta-sheet from a sucrose specific porin as cartoon with the side-chains visible

Submitted by:

mariu.mihasan

Thu, 2020-04-16 09:32

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General Information

Model ID

3DPX-013886

Category

Proteins, Macromolecules and Viruses

Keyword(s)

beta-sheet, teaching

Protein Data Bank ID

1A0S

A beta-sheet from 1A0S.pdb containing amino acids 334 ADTWRIASYGTTPLSENWSVAPAMLAQRSKDRYADGDSYQWATFNLRLIQAINQ387, chain P, visualized as a cartoon. Stabilizing H-bonds between the peptide backbone atoms as well as sidechains are highlighted.

I made this to use it for teaching Biochemistry and Structural Biology.

Segmentation Software

CURA

3D Modeling/CAD Software

Chimera

Model Origin

Molecular data (e.g., crystallography)

How to Make

Printer Technology/Material

Material Extrusion

Polylactic Acid (PLA)

Printer Make/Model

Creality Ender 5 Pro

Print Units

Scale At Given Print Units

350x

Printer-specific Build Instructions

Build file

CE5_350x_b_sheet_cartoon+sidechains_repaired_meshmixer_flat.gcode

Build time

13 hours

Pre- and Postprocessing Instructions

The model was re-orientated using the Auto-orientation plugin in Cura. I have used concentric supports and found to be easier to remove. A few side-chains snapped, but I glued them back.

Attribution

Attribution Instructions

Marius Mihășan, BioActive Research Group, Biochemistry and Molecular Biology Laboratory, Faculty of Biology Alexandru Ioan Cuza University of Iasi, Room B228, Carol I Blvd, no 20A, Iasi, Romania, 700506 Tel: +40(0)232202434, Fax: +40(0)232201472, e-mail: marius.mihasan@uaic.ro
https://mail.uaic.ro/~marius.mihasan/index.html

A beta-sheet from a sucrose specific porin as cartoon with the side-chains visible

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