U.S. Department of Health and Human Services — National Institutes of Health

Crystal structure of SpCas9 variant VRER bound to sgRNA and TGCG PAM target DNA

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Created on Wed, 2016-07-20 12:44, last updated on Wed, 2016-07-20 12:44

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General Information

This Model was autogenerated from the "Quick Submit" tool.

Model ID

3DPX-003488

Category

Proteins, Macromolecules and Viruses

Keyword(s)

HYDROLASE-DNA-RNA COMPLEX, CRISPR, Cas9, ENDONUCLEASE, PAM, GENOME EDITING, RNP, PROTEIN-RNA COMPLEX

Protein Data Bank ID

Experimental Method

X-RAY DIFFRACTION

Resolution

2.70

Model Details

Associated Species

ESCHERICHIA COLI

Oligomeric Details

tetrameric

R-Factor

0.2159

Scattering Type

x-ray

Attribution

PubMed ID

Digital Object Identifier (DOI)

10.1016/J.MOLCEL.2016.02.020

Citation Title

Structural Plasticity of Pam Recognition by Engineered Variants of the RNA-Guided Endonuclease Cas9.

Citation Year

2016

STL/VRML Files

PDB-5FW3-ribbon-secondary.wrl

PDB-5FW3-ribbon-rainbow.wrl

PDB-5FW3-ribbon-bychain.wrl

PDB-5FW3-ribbon.stl

PDB-5FW3-ribbon-thick.stl

PDB-5FW3-surf-bychain.wrl

PDB-5FW3-surf-hydropathy.wrl

PDB-5FW3-surf-coulombic.wrl

PDB-5FW3-surf.stl

X3D Files

PDB-5FW3-ribbon-secondary.x3d

PDB-5FW3-ribbon-rainbow.x3d

PDB-5FW3-ribbon-bychain.x3d

PDB-5FW3-ribbon.x3d

PDB-5FW3-ribbon-thick.x3d

PDB-5FW3-surf-bychain.x3d

PDB-5FW3-surf-hydropathy.x3d

PDB-5FW3-surf-coulombic.x3d

PDB-5FW3-surf.x3d

Blender Files

PDB-5FW3-ribbon-secondary.blend

PDB-5FW3-ribbon-rainbow.blend

PDB-5FW3-ribbon-bychain.blend

PDB-5FW3-ribbon.blend

PDB-5FW3-ribbon-thick.blend

PDB-5FW3-surf-bychain.blend

PDB-5FW3-surf-hydropathy.blend

PDB-5FW3-surf-coulombic.blend

PDB-5FW3-surf.blend

PDB-5FW3-ribbon-secondary.x3d

PDB-5FW3-ribbon-rainbow.x3d

PDB-5FW3-ribbon-bychain.x3d

PDB-5FW3-ribbon.x3d

PDB-5FW3-ribbon-thick.x3d

PDB-5FW3-surf-bychain.x3d

PDB-5FW3-surf-hydropathy.x3d

PDB-5FW3-surf-coulombic.x3d

PDB-5FW3-surf.x3d

QR Code for https://3dprint.nih.gov/discover/3dpx-003488

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